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2005
Tudela, S, Coll M, Palomera I.  2005.  Developing an operational reference framework for fisheries management on the basis of a two-dimensional index of ecosystem impact. Ices Journal of Marine Science. 62:585-591. Abstract
2006
Coll, M, Shannon LJ, Moloney CL, Palomera I, Tudela S.  2006.  Comparing trophic flows and fishing impacts of a NW Mediterranean ecosystem with coastal upwelling systems by means of standardized models and indicators. Ecological Modelling. 198:53-70. Abstract
Coll, M, Palomera I, Tudela S, Sardà F.  2006.  Trophic flows, ecosystem structure and fishing impacts in the South Catalan Sea, Northwestern Mediterranean. Journal of Marine Systems. 59:63-96. Abstract
2007
Coll, M, Morello EB, Santojanni A, Palomera I, Piccinetti C, Arneri E.  2007.  Analyzing temporal dynamics of Adriatic Sea food web using trophodynamic indicators and ecological models. The 6th European Conference on Ecological Modelling, ECEM’07.
Coll, M, Santojanni A, Palomera I, Tudela S, Arneri E.  2007.  An ecological model of the Northern and Central Adriatic Sea: Analysis of ecosystem structure and fishing impacts. Journal of Marine Systems. 67:119-154.
Palomera, I, Olivar MP, Salat J, Sabates A, Coll M, Garcia A, Morales-Nin B.  2007.  Small pelagic fish in the NW Mediterranean Sea: An ecological review. Progress in Oceanography. 74:377-396.
2008
Coll, M, Libralato S, Tudela S, Palomera I, Pranovi F.  2008.  Ecosystem Overfishing in the Ocean. PLoS ONE. 3:e3881. Abstract
Coll, M, Bahamon N, Sarda F, Palomera I, Tudela S, Suuronen P.  2008.  Improved trawl selectivity: effects on the ecosystem in the South Catalan Sea (NW Mediterranean). Marine Ecology-Progress Series. 355:131-147.
Libralato, S, Coll M, Tudela S, Palomera I, Pranovi F.  2008.  Novel index for quantification of ecosystem effects of fishing as removal of secondary production. Marine Ecology Progress Series. 355:107-129. Abstract
2009
Coll, M, Palomera I, Tudela S.  2009.  Decadal changes in a NW Mediterranean Sea food web in relation to fishing exploitation. Ecological Modelling. 220:2088-2102. Abstract
Coll, M, Santojanni A, Palomera I, Arneri E.  2009.  Food-web changes in the Adriatic Sea over the last three decades. Marine Ecology Progress Series. 381:17-37. Abstract
Coll, M, Piroddi C, Palomera I, Arneri E, Christensen V.  2009.  Main drivers of marine resources and food-web changes in the Mediterranean Sea. Ecopath 25 Years Conference Proceedings: Extended Abstracts . :148-150.
Vargiu, G, Coll M, Palomera I, Tudela S.  2009.  Recovery scenarios of a highly exploited species, Merluccius merluccius, in the NW Mediterranean Sea using an ecosystem approach. Fisheries Centre Research Report . 17(3):33-34.
2010
Libralato, S, Coll M, Tempesta M, Santojanni A, Spoto M, Palomera I, Arneri E, Solidoro C.  2010.  Food-web traits of protected and exploited areas of the Adriatic Sea. Biological Conservation. 143:2182–2194.
Coll, M, Santojanni A, Palomera I, Arneri E.  2010.  Ecosystem assessment of the North-Central Adriatic (Mediterranean Sea): towards a multivariate reference framework. Marine Ecology Progress Series. 417:193-210.
Libralato, S, Arneri E, Bahamon N, Coll M, Cossarini G, Morello EB, Palomera I, Santojanni A, Solidoro C.  2010.  Effects of climate-driven changes on the North-Central Adriatic Food web: insights from an End-to-End approach.
2011
Navarro, J., Coll M, Louzao M, Forero MG, Oro D, Palomera I.  2011.  Comparison of ecosystem modelling and isotopic approach as ecological tools to investigate food webs in the NW Mediterranean Sea. Journal of Experimental Marine Biology and Ecology. (401)
2012
Fouzai, N, Coll M, Palomera I, Santojanni A, Arneri E, Christensen V.  2012.  Fishing management scenarios to rebuild exploited resources and ecosystems of the Northern-Central Adriatic (Mediterranean Sea). Journal of Marine Systems. 102-105