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Book
Polovina, J J, Ow MD.  1983.  ECOPATH : a user's manual and program listings. :46p.;p.,28cm..
Olivieri, RA, Cohen A, Chavez FP.  1993.  An ecosystem model of Monterey Bay, California. :315-322. Abstract
Pauly, D, Sambilay, V. J., Opitz S.  1993.  Estimates of relative food consumption by fish and invertebrate populations, required for modelling the Bolinao reef ecosystem, Philippines. :236-251. Abstract
Dalsgaard, J P T, Oficial R T.  1998.  Modeling and analyzing the agroecological performance of farms with ECOPATH. :vi,54p.:p.,ill.;,28cm..
Opitz, S.  1993.  A quantitative model of the trophic interactions in a Caribbean coral reef ecosystem. :259-267. Abstract
Opitz, S.  1996.  Trophic interactions in Caribbean coral reefs. Abstract
Book Chapter
Okey, TA.  2001.  A 'straw-man' Ecopath model of the Middle Atlantic Bight continental shelf, United States. Fisheries Impacts on North Atlantic Ecosystems: Models and Analyses. :151-166.
Brown, CJ, Fulton EA, Hobday AJ, Matear R, Possingham H, Bulman C, Christensen V, Forrest R, Gehrke N, Gribble N et al..  2009.  Ecological interactions within marine ecosystems determine winners and losers under climate change. Ecopath 25 Years Conference Proceedings: Extended Abstracts . :90-93.
Christensen, V, Pauly. D.  1998.  The Ecopath approach and software. Trophic Mass-Balance Model of Alaskas Prince William Sound Ecosystem, for the Post-Spill Period 1994-1996.. :8-11.
Okey, TA, Pugliese R.  2001.  A preliminary Ecopath model of the Atlantic continental shelf adjacent to the southeastern United States. Fisheries Impacts on North Atlantic Ecosystems: Models and Analyses. :167-181.
Conference Paper
Christensen, V, Boustany A, Buszowski J, Cheung W, Dunn DC, Felinto D, Folke C, Halpin PN., Kearney K, McOwen C et al..  2012.  Life in the future ocean: the nereus model. AAAS Annual Meeting. Session Predicting the future Ocean: Nereus Program. 16-20 February 2012.
Journal Article
Rybarczyk, H, Elkaim B, Ochs L, Loquet N.  2003.  Analysis of the trophic network of a macrotidal ecosystem: the Bay of Somme (Eastern Channel). Estuarine Coastal and Shelf Science. 58:405-421. Abstract
Polovina, JJ, Ow MD.  1985.  An approach to estimating an ecosystem box model. Fishery Bulletin. 83:457-460. Abstract
Navarro, J., Coll M, Louzao M, Forero MG, Oro D, Palomera I.  2011.  Comparison of ecosystem modelling and isotopic approach as ecological tools to investigate food webs in the NW Mediterranean Sea. Journal of Experimental Marine Biology and Ecology. (401)
Ortiz, M, Wolff M.  2002.  Dynamical simulation of mass-balance trophic models for benthic communities of north-central Chile: assessment of resilience time under alternative management scenarios. Ecological Modelling. 148:277-291. Abstract
Ortiz, M.  2008.  The effect of a crab predator (Cancer porteri) on secondary producers versus ecological model predictions in Tongoy Bay (south-east Pacific coast): implications for management and fisheries. Aquatic Conservation-Marine and Freshwater Ecosystems. 18:923-929.
Österblom, H, Hansson S, Larsson U, Hjerne O, Wulff F, Elmgren R, Folke C.  2007.  Human-induced trophic cascades and ecological regime shifts in the Baltic Sea. Ecosystems. 10:877-889.
Jordán, F, Okey TA, Bauer B, Libralato S.  2008.  Identifying important species: Linking structure and function in ecological networks. Ecological Modelling. 216:75-80. Abstract
Dalsgaard, JPT, Oficial RT.  1995.  Insights into the ecological performance of agroecosystems with ECOPATH II. Naga. Manila. 18:26-27. Abstract
Allain, V., Nicol S, Polovina J, Coll M, Olson R, Griffiths S, Dambacher J, Young J, Jurado-Molina J, Hoyle S et al..  2012.  International workshop on opportunities for Ecosystem Approaches to Fisheries Management in the Pacific Ocean tuna fisheries. Reviews in Fish Biology and Fisheries. In press
Ortiz, M.  2008.  Mass balanced and dynamic simulations of trophic models of kelp ecosystems near the Mejillones Peninsula of northern Chile (SE Pacific): Comparative network structure and assessment of harvest strategies. Ecological Modelling. 216:31-46.
Ortiz, M, Wolff M.  2008.  Mass-balanced trophic and loop models of complex benthic systems in northern Chile (SE Pacific) to improve sustainable interventions: a comparative analysis. Hydrobiologia. 605:1-10.
Watters, GM, Olson RJ, Francis RC, Fiedler PC, Polovina JJ, Reilly SB, Aydin KY, Boggs CH, Essington TE, Walters CJ et al..  2003.  Physical forcing and the dynamics of the pelagic ecosystem in the eastern tropical Pacific: simulations with ENSO-scale and global-warming climate drivers. Canadian Journal of Fisheries and Aquatic Sciences. 60:1161-1175. Abstract
Okey, TA, Vargo GA, Mackinson S, Vasconcellos M, Mahmoudi B, Meyer CA.  2004.  Simulating community effects of sea floor shading by plankton blooms over the West Florida Shelf. Ecological Modelling. 172:339-359. Abstract
Palomera, I, Olivar MP, Salat J, Sabates A, Coll M, Garcia A, Morales-Nin B.  2007.  Small pelagic fish in the NW Mediterranean Sea: An ecological review. Progress in Oceanography. 74:377-396.